ARDB-Antibiotic Resistance Genes Database

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OrganismPseudomonas mendocina ymp
Database LinkNCBI Taxon ID: 399739
NCBI Genome Project ID: 17457

Genome Information:
Replicon NameRefSeqGenBankLength(bp)
chromosomeNC_009439CP0006805072807


Resistance Genes:
GeneReplicon SourceBest HitSimilarityTypecutoffResistanceRequireDescription
Above Similarity Cutoff Genes
YP_001186705chromosomeYP_00118670595.28%mexw%mexv oprm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001187672chromosomeYP_00118767291.50%mexf%chloramphenicol fluoroquinolone mexe oprn Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001189196chromosomeYP_00134592177.78%mexb%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexa oprm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001189197chromosomeYP_00134592265.85%oprm%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexa mexb mexj mexk mexv mexw mexx mexy Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001187671chromosomeYP_79074264.64%oprn%chloramphenicol fluoroquinolone mexe mexf Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001187673chromosomeYP_00134810564.01%mexe%chloramphenicol fluoroquinolone mexf oprn Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001189195chromosomeEAZ6096463.99%mexa%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexb oprm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001188573chromosomeAAK1208862.86%aac3ia%astromicin gentamicin sisomicin Aminoglycoside N-acetyltransferase, which modifies aminoglycosides by acetylation.
YP_001187531chromosomeYP_78901261.41%bl1_pao%cephalosporin Class C beta-lactamase. This enzyme breaks the beta-lactam antibiotic ring open and deactivates the molecule's antibacterial properites.
YP_001186596chromosomeYP_00134989953.50%%
YP_001189492chromosomeABG6809553.31%ksga%kasugamycin Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. Its inactivation leads to kasugamycin resistance.
YP_001187670chromosomeYP_00110201753.01%ant3ia%spectinomycin streptomycin Aminoglycoside O-nucleotidylyltransferase, which modifies aminoglycosides by adenylylation.
YP_001188946chromosomeCAA0558950.77%ykkd%na_antimicrobials ykkc Small Multidrug Resistance (SMR) protein family. Multidrug resistance efflux pump, which consists of two proteins.
YP_001186113chromosomeBAB3503748.89%emre%aminoglycoside emrd Multidrug resistance efflux pump.
YP_001187667chromosomeCAD0773048.85%baca%bacitracin Undecaprenyl pyrophosphate phosphatase, which consists in the sequestration of Undecaprenyl pyrophosphate.
YP_001187401chromosomeYP_00145324748.51%mdtk%enoxacin norfloxacin Major facilitator superfamily transporter. Multidrug resistance efflux pump.
YP_001186757chromosomeYP_79231648.25%%
YP_001187327chromosomeAAK5849248.11%vanrc%vancomycin vanc vansc vant vanxyc VanC type vancomycin resistance operon genes, which can synthesize peptidoglycan with modified C-terminal D-Ala-D-Ala to D-alanine--D-serine.
YP_001189688chromosomeCAL4845746.95%dfra26%trimethoprim Group A drug-insensitive dihydrofolate reductase, which can not be inhibited by trimethoprim.
YP_001189757chromosomeAAK8871245.07%catb1%chloramphenicol Group B chloramphenicol acetyltransferase, which can inactivate chloramphenicol. Also referred to as xenobiotic acetyltransferase.
YP_001186326chromosomeYP_93407344.27%ceob%chloramphenicol ceoa opcm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001186668chromosomeZP_0136433343.64%%
YP_001187682chromosomeYP_79231643.06%%
YP_001187706chromosomeYP_79231642.57%%
YP_001187402chromosomeABB5337241.77%vanhb%vancomycin vanb vanrb vansb vanwb vanxb vanyb VanB type vancomycin resistance operon genes, which can synthesize peptidoglycan with modified C-terminal D-Ala-D-Ala to D-alanine--D-lactate.
YP_001187500chromosomeYP_00117612841.25%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001185809chromosomeYP_00117612840.61%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001187104chromosomeYP_00145376040.27%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001189617chromosomeCAA3747740.14%otra%tetracycline Ribosomal protection protein, which protects ribosome from the translation inhibition of tetracycline.
YP_001187855chromosomeYP_00157104140.09%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
Below Similarity Cutoff Genes
YP_001189278chromosomeYP_00145266240.83%pbp280%penicillin The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits)