ARDB-Antibiotic Resistance Genes Database

HOME DOCUMENTATION BLAST ADVANCED  SEARCH BROWSE
     Help

OrganismSinorhizobium medicae WSM419
Database LinkNCBI Taxon ID: 366394
NCBI Genome Project ID: 16304

Genome Information:
Replicon NameRefSeqGenBankLength(bp)
plasmid pSMED01NC_009620CP0007391570951
plasmid pSMED02NC_009621CP0007401245408
plasmid pSMED03NC_009622CP000741219313
chromosomeNC_009636CP0007383781904


Resistance Genes:
GeneReplicon SourceBest HitSimilarityTypecutoffResistanceRequireDescription
Above Similarity Cutoff Genes
YP_001327881chromosomeABB4302964.98%aac3iv%apramycin dibekacin gentamicin netilmicin sisomicin tobramycin Aminoglycoside N-acetyltransferase, which modifies aminoglycosides by acetylation.
YP_001325757chromosomeYP_93407361.32%ceob%chloramphenicol ceoa opcm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001313637plasmid pSMED01YP_00137112761.14%bl1_och%cephalosporin Class C beta-lactamase. This enzyme breaks the beta-lactam antibiotic ring open and deactivates the molecule's antibacterial properites.
YP_001325820chromosomeCAA3903855.64%aac6if%amikacin dibekacin isepamicin netilmicin sisomicin tobramycin Aminoglycoside N-acetyltransferase, which modifies aminoglycosides by acetylation.
YP_001327995chromosomeBAB3503753.98%emre%aminoglycoside emrd Multidrug resistance efflux pump.
YP_001326166chromosomeZP_0082595753.19%%
YP_001327959chromosomeYP_00109637952.19%aph33ib%streptomycin Aminoglycoside O-phosphotransferase, which modifies aminoglycosides by phosphorylation.
YP_001329054chromosomeYP_34848852.15%mexd%erythromycin fluoroquinolone glycylcycline roxithromycin mexc oprj Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001326929chromosomeAAB0044650.38%aph6ic%streptomycin Aminoglycoside O-phosphotransferase, which modifies aminoglycosides by phosphorylation.
YP_001326285chromosomeP3089747.33%bl2c_bro%carbenicillin penicillin Class A beta-lactamase. This enzyme breaks the beta-lactam antibiotic ring open and deactivates the molecule's antibacterial properites.
YP_001327480chromosomeYP_00138962147.17%vatb%streptogramin_a Virginiamycin A acetyltransferase, which can inactivate the target drug.
YP_001328308chromosomeYP_00163312746.37%ceob%chloramphenicol ceoa opcm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001314795plasmid pSMED02AAK8871246.27%catb1%chloramphenicol Group B chloramphenicol acetyltransferase, which can inactivate chloramphenicol. Also referred to as xenobiotic acetyltransferase.
YP_001327687chromosomeCAL4845744.85%dfra26%trimethoprim Group A drug-insensitive dihydrofolate reductase, which can not be inhibited by trimethoprim.
YP_001329055chromosomeABR1327044.70%acra%acriflavin aminoglycoside beta_lactam glycylcycline macrolide acrb tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001328640chromosomeAAV8041044.44%tett%tetracycline Ribosomal protection protein, which protects ribosome from the translation inhibition of tetracycline.
YP_001314312plasmid pSMED02BAA0294543.53%tmrb%tunicamycin Mechanism unknown.
YP_001328735chromosomeYP_00143854142.80%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001312493plasmid pSMED01Q8ZQE442.36%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001325758chromosomeZP_0156388541.38%%
YP_001328645chromosomeYP_00133457841.20%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001326610chromosomeYP_00143854141.10%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_001327636chromosomeCAG3089340.91%aph3ib%gentamincin_b kanamycin lividomycin neomycin paromomycin ribostamycin Aminoglycoside O-phosphotransferase, which modifies aminoglycosides by phosphorylation.
YP_001313099plasmid pSMED01YP_93407340.41%ceob%chloramphenicol ceoa opcm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_001313699plasmid pSMED01YP_00157104140.09%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
Below Similarity Cutoff Genes
YP_001328184chromosomeAAS1636360.20%cml_e390%chloramphenicol Major facilitator superfamily transporter, chloramphenicol efflux pump.
YP_001327067chromosomeBAC5893644.81%tet3480%tetracycline Xanthine-guanine phosphoribosyltransferase. Mechanism detail unknown.
YP_001326106chromosomeP0845740.22%sta80%streptothricin Streptothricin acetyltransferase (STAT).