ARDB-Antibiotic Resistance Genes Database

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OrganismSilicibacter pomeroyi DSS-3
Database LinkNCBI Taxon ID: 246200
NCBI Genome Project ID: 281

Genome Information:
Replicon NameRefSeqGenBankLength(bp)
chromosomeNC_003911CP0000314109442
plasmid megaplasmidNC_006569CP000032491611


Resistance Genes:
GeneReplicon SourceBest HitSimilarityTypecutoffResistanceRequireDescription
Above Similarity Cutoff Genes
YP_166736chromosomeYP_00143854147.47%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_167395chromosomeABG7029245.00%arna%polymyxin Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
YP_167261chromosomeAAN8081144.86%emre%aminoglycoside emrd Multidrug resistance efflux pump.
YP_167262chromosomeCAA3747743.15%otra%tetracycline Ribosomal protection protein, which protects ribosome from the translation inhibition of tetracycline.
YP_165258plasmid megaplasmidAAR9604341.57%tetc%tetracycline Major facilitator superfamily transporter, tetracycline efflux pump.
YP_166275chromosomeAAL2744541.23%vanre%vancomycin vane vanse vante vanxye VanE type vancomycin resistance operon genes, which can synthesize peptidoglycan with modified C-terminal D-Ala-D-Ala to D-alanine--D-serine.
YP_166037chromosomeABF2024040.40%catb3%chloramphenicol Group B chloramphenicol acetyltransferase, which can inactivate chloramphenicol. Also referred to as xenobiotic acetyltransferase.
YP_166638chromosomeYP_34838940.40%mexf%chloramphenicol fluoroquinolone mexe oprn Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
YP_167912chromosomeQ83LR740.30%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
YP_167874chromosomeYP_00143854140.09%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
Below Similarity Cutoff Genes
YP_167370chromosomeBAC5893647.40%tet3480%tetracycline Xanthine-guanine phosphoribosyltransferase. Mechanism detail unknown.