ARDB-Antibiotic Resistance Genes Database

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OrganismPseudomonas syringae pv. tomato str. DC3000
Database LinkNCBI Taxon ID: 223283
NCBI Genome Project ID: 359

Genome Information:
Replicon NameRefSeqGenBankLength(bp)
chromosomeNC_004578AE0168536397126
plasmid pDC3000BNC_004632AE01685467473
plasmid pDC3000ANC_004633AE01685573661


Resistance Genes:
GeneReplicon SourceBest HitSimilarityTypecutoffResistanceRequireDescription
Above Similarity Cutoff Genes
NP_792892chromosomeNP_79289291.16%mexf%chloramphenicol fluoroquinolone mexe oprn Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_794060chromosomeAAQ9218180.81%mexb%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexa oprm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_792893chromosomeAAG0588370.72%oprn%chloramphenicol fluoroquinolone mexe mexf Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_792891chromosomeAAG0588169.90%mexe%chloramphenicol fluoroquinolone mexf oprn Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_792401chromosomeYP_34848869.30%mexd%erythromycin fluoroquinolone glycylcycline roxithromycin mexc oprj Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_794059chromosomeEAZ6096466.67%mexa%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexb oprm Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_794061chromosomeYP_00134592265.01%oprm%aminoglycoside beta_lactam fluoroquinolone tetracycline tigecycline mexa mexb mexj mexk mexv mexw mexx mexy Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_793751chromosomeYP_00134989960.89%%
NP_793573chromosomeCAL2169353.57%rosa%fosmidomycin rosb Efflux pump/potassium antiporter system. RosA: Major facilitator superfamily transporter. RosB: Potassium antiporter.
NP_792636chromosomeYP_00143854151.08%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
NP_793373chromosomeAAY9331550.40%bl1_pse%cephalosporin Class C beta-lactamase. This enzyme breaks the beta-lactam antibiotic ring open and deactivates the molecule's antibacterial properites.
NP_790398chromosomeABG6809549.61%ksga%kasugamycin Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. Its inactivation leads to kasugamycin resistance.
NP_790904chromosomeAAA8687147.06%vatb%streptogramin_a Virginiamycin A acetyltransferase, which can inactivate the target drug.
NP_792933chromosomeCAD0773046.15%baca%bacitracin Undecaprenyl pyrophosphate phosphatase, which consists in the sequestration of Undecaprenyl pyrophosphate.
NP_791158chromosomeAAC1473745.58%catb2%chloramphenicol Group B chloramphenicol acetyltransferase, which can inactivate chloramphenicol. Also referred to as xenobiotic acetyltransferase.
NP_794712chromosomeAAN8081145.45%emre%aminoglycoside emrd Multidrug resistance efflux pump.
NP_791932chromosomeYP_00145376044.34%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
NP_791981chromosomeYP_00133457843.10%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
NP_792402chromosomeYP_00143887342.86%acra%acriflavin aminoglycoside beta_lactam glycylcycline macrolide acrb tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump.
NP_790286chromosomeCAL4845742.07%dfra26%trimethoprim Group A drug-insensitive dihydrofolate reductase, which can not be inhibited by trimethoprim.
NP_794913chromosomeYP_00143854141.85%macb%macrolide maca tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
NP_790218chromosomeYP_00134989941.57%%
NP_792635chromosomeABG6890841.08%maca%macrolide macb tolc Resistance-nodulation-cell division transporter system. Multidrug resistance efflux pump. Macrolide-specific efflux system.
NP_793073chromosomeAAS1831440.89%%
NP_792522chromosomeAAL2744540.62%vanre%vancomycin vane vanse vante vanxye VanE type vancomycin resistance operon genes, which can synthesize peptidoglycan with modified C-terminal D-Ala-D-Ala to D-alanine--D-serine.
NP_791740chromosomeYP_00145357740.17%mdtg%deoxycholate fosfomycin Major facilitator superfamily transporter. Multidrug resistance efflux pump.
Below Similarity Cutoff Genes
NP_794865chromosomeZP_0015544245.33%pbp1a80%penicillin The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits)
NP_794559chromosomeYP_00145266240.14%pbp280%penicillin The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits)